STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000015802annotation not available (1271 aa)    
Predicted Functional Partners:
babam1
BRISC and BRCA1 A complex member 1.
    
 0.929
babam2
BRISC and BRCA1 A complex member 2.
    
 0.925
brcc3
BRCA1/BRCA2-containing complex subunit 3.
    
 0.925
brca1
BRCA1 DNA repair associated.
    
 0.917
bard1
BRCA1 associated RING domain 1.
    
 0.841
rps27a
Ribosomal protein S27a.
    
  0.826
LOC114662601
Polyubiquitin-like.
    
  0.810
lyrm4
LYR motif containing 4.
    
 0.749
LOC114665637
Heme-binding protein 1-like.
    
 0.749
ENSECRP00000013561
annotation not available
    
  0.739
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.