STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc6a15Solute carrier family 6 member 15. (732 aa)    
Predicted Functional Partners:
stx2
Syntaxin 2.
    
 0.592
stx1a
Syntaxin 1A.
    
 0.578
stx3
Syntaxin 3.
    
 0.578
stx4
Syntaxin 4.
    
 0.578
LOC114643069
syntaxin-1B.
    
 0.578
stx11
Syntaxin 11.
    
 0.553
LOC114642337
Syntaxin-11-like.
    
 0.553
LOC114663121
Syntaxin-3-like.
    
 0.498
camk2b
Calcium/calmodulin dependent protein kinase II beta.
   
  0.482
camk2d
Calcium/calmodulin dependent protein kinase II delta.
   
  0.482
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.