STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114659720Tyrosine-protein phosphatase non-receptor type substrate 1-like. (677 aa)    
Predicted Functional Partners:
cd79a
CD79a molecule.
   
 0.881
LOC114667991
TYRO protein tyrosine kinase-binding protein-like.
   
 0.772
LOC114656897
Complement C1q subcomponent subunit C-like.
   
  0.683
LOC114656302
Tyrosine-protein phosphatase non-receptor type 11-like.
    
 0.680
ptpn6
Protein tyrosine phosphatase non-receptor type 6.
    
 0.680
ptpn11
Protein tyrosine phosphatase non-receptor type 11.
    
 0.680
LOC114651573
Rano class II histocompatibility antigen, A beta chain-like.
    
  0.657
LOC114669388
H-2 class II histocompatibility antigen, E-S beta chain-like.
    
  0.657
syk
Spleen associated tyrosine kinase.
   
  0.608
LOC114662923
Tyrosine-protein kinase ZAP-70.
   
  0.608
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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