STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccnfCyclin F. (759 aa)    
Predicted Functional Partners:
skp1
S-phase kinase associated protein 1.
    
 0.966
skp2
S-phase kinase associated protein 2.
   
 0.929
cdc6
Cell division cycle 6.
   
 0.927
cul1
Cullin 1.
    
 0.922
ENSECRP00000004139
annotation not available
   
 0.922
ENSECRP00000025350
annotation not available
    
 0.922
cdc20
Cell division cycle 20.
   
 0.922
espl1
Extra spindle pole bodies like 1, separase.
   
  
 0.870
rbx1
Ring-box 1.
    
 0.856
ccp110
Centriolar coiled-coil protein 110.
    
 
 0.853
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.