STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114649036Fibroblast growth factor 11-like. (202 aa)    
Predicted Functional Partners:
LOC114650026
Fibroblast growth factor receptor 1-like.
    
 0.782
LOC114660281
Fibroblast growth factor receptor 4-like.
    
 0.782
fgfr2
Fibroblast growth factor receptor 2.
    
 0.782
fgfr3
Fibroblast growth factor receptor 3.
    
 0.782
LOC114660274
Fibroblast growth factor receptor-like 1.
    
 0.766
stil
STIL centriolar assembly protein.
    
 0.763
ret
Ret proto-oncogene.
    
 0.763
fgfrl1
Fibroblast growth factor receptor like 1.
    
 0.763
ENSECRP00000011645
annotation not available
    
 0.747
met
MET proto-oncogene, receptor tyrosine kinase.
   
 0.716
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.