STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000016436annotation not available (389 aa)    
Predicted Functional Partners:
cdyl
Chromodomain Y like.
   
 0.869
cdyl2
Chromodomain Y like 2.
   
 0.869
ash2l
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.751
rbbp5
RB binding protein 5, histone lysine methyltransferase complex subunit.
    
 0.751
eed
Embryonic ectoderm development.
    
 0.738
suz12
SUZ12 polycomb repressive complex 2 subunit.
    
 0.732
mphosph8
M-phase phosphoprotein 8.
    
 0.731
kdm2a
Lysine demethylase 2A.
    
 0.703
fbxl19
F-box and leucine rich repeat protein 19.
    
 0.703
kdm2b
Lysine demethylase 2B.
    
 0.703
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.