STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
eri2ERI1 exoribonuclease family member 2. (668 aa)    
Predicted Functional Partners:
LOC114660473
Oocyte-specific histone RNA stem-loop-binding protein 2-like.
   
 0.870
slbp
Stem-loop binding protein.
   
 0.870
lsm11
LSM11, U7 small nuclear RNA associated.
     
 0.729
dicer1
Dicer 1, ribonuclease III.
    
 
 0.668
exosc5
Exosome component 5.
   
 0.626
rpl30
Ribosomal protein L30.
     
 0.619
rpl19
Ribosomal protein L19.
    
  0.615
rpl4
Ribosomal protein L4.
    
 0.602
tex10
Testis expressed 10.
   
 
  0.592
exosc4
Exosome component 4.
   
 0.590
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.