STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000016476annotation not available (487 aa)    
Predicted Functional Partners:
ENSECRP00000016446
annotation not available
 
   
  0.980
map3k1
Mitogen-activated protein kinase kinase kinase 1.
    
0.863
map4k4
Mitogen-activated protein kinase kinase kinase kinase 4.
  
  
 
0.817
traf6
TNF receptor associated factor 6.
    
 0.745
mink1
Misshapen like kinase 1.
  
  
 
0.682
tnik
TRAF2 and NCK interacting kinase.
  
  
 
0.682
map3k20
Mitogen-activated protein kinase kinase kinase 20.
  
 
 
0.673
map3k7
Mitogen-activated protein kinase kinase kinase 7.
    
 0.641
myo6
Myosin VI.
 
  
  0.582
rnf41
Ring finger protein 41.
    
  0.574
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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