STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
qprtQuinolinate phosphoribosyltransferase. (334 aa)    
Predicted Functional Partners:
naprt
Nicotinate phosphoribosyltransferase.
   
 0.964
nadsyn1
NAD synthetase 1.
    
 0.952
ENSECRP00000009957
annotation not available
    
 0.943
nmnat2
Nicotinamide nucleotide adenylyltransferase 2.
    
 0.934
nudt15
Nudix hydrolase 15.
    
 0.926
sdha
Succinate dehydrogenase complex flavoprotein subunit A.
   
 0.914
malsu1
Mitochondrial assembly of ribosomal large subunit 1.
    
 0.900
aspdh
Aspartate dehydrogenase domain containing.
  
 
  0.880
nmrk1
Nicotinamide riboside kinase 1.
     
 0.879
nmrk2
Nicotinamide riboside kinase 2.
     
 0.879
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.