STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
txnrd1Thioredoxin reductase 1. (463 aa)    
Predicted Functional Partners:
bckdhb
Branched chain keto acid dehydrogenase E1 subunit beta.
  
 0.967
pdhb
Pyruvate dehydrogenase E1 beta subunit.
  
 0.967
dbt
Dihydrolipoamide branched chain transacylase E2.
  
 0.954
dlat
Dihydrolipoamide S-acetyltransferase.
  
 0.954
dlst
Dihydrolipoamide S-succinyltransferase.
  
 0.954
bckdha
Branched chain keto acid dehydrogenase E1 subunit alpha.
  
 
 0.950
ogdh
Oxoglutarate dehydrogenase.
  
 0.929
dhtkd1
Dehydrogenase E1 and transketolase domain containing 1.
  
 0.929
eef1g
Eukaryotic translation elongation factor 1 gamma.
  
 0.894
sdhb
Succinate dehydrogenase complex iron sulfur subunit B.
  
 0.887
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.