STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glyr1Glyoxylate reductase 1 homolog. (522 aa)    
Predicted Functional Partners:
atp6v1a
ATPase H+ transporting V1 subunit A.
    
 0.969
ENSECRP00000013329
annotation not available
    
 0.969
ENSECRP00000029998
annotation not available
    
 0.969
ints1
Integrator complex subunit 1.
   
 0.953
ints7
Integrator complex subunit 7.
   
 0.942
h6pd
Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.
  
 
 0.938
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
     
 0.938
kdm1b
Lysine demethylase 1B.
    
 
 0.938
LOC114655413
Probable flavin-containing monoamine oxidase A.
    
 
 0.936
LOC114650247
Amine oxidase [flavin-containing]-like.
    
 
 0.936
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.