STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atp9aATPase phospholipid transporting 9A (putative). (977 aa)    
Predicted Functional Partners:
LOC114656119
Thioredoxin domain-containing protein 3 homolog.
     
 0.946
dnai1
Dynein axonemal intermediate chain 1.
   
 
 0.810
drc1
Dynein regulatory complex subunit 1.
   
 
 0.800
ccdc65
Coiled-coil domain containing 65.
   
 
 0.798
wdr78
WD repeat domain 78.
   
 
 0.754
wdr63
WD repeat domain 63.
   
 
 0.754
dnai2
Dynein axonemal intermediate chain 2.
   
 
 0.686
LOC114664422
Dynein intermediate chain 2, axonemal-like.
   
 
 0.686
mon2
MON2 homolog, regulator of endosome-to-Golgi trafficking.
   
 
 0.649
atp8b2
ATPase phospholipid transporting 8B2.
    
0.570
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.