STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glud1Glutamate dehydrogenase 1. (542 aa)    
Predicted Functional Partners:
bckdha
Branched chain keto acid dehydrogenase E1 subunit alpha.
  
 
 0.983
fdxr
Ferredoxin reductase.
  
 0.970
fads6
Fatty acid desaturase 6.
  
 0.970
got2
Glutamic-oxaloacetic transaminase 2.
   
 0.964
cs
Citrate synthase.
  
 0.962
oat
Ornithine aminotransferase.
  
 
 0.961
sirt4
Sirtuin 4.
   
 0.952
aldh18a1
Aldehyde dehydrogenase 18 family member A1.
    
 0.946
aldh5a1
Aldehyde dehydrogenase 5 family member A1.
  
 0.945
aldh4a1
Aldehyde dehydrogenase 4 family member A1.
  
 0.944
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.