STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sall4Spalt like transcription factor 4. (1080 aa)    
Predicted Functional Partners:
ENSECRP00000002222
annotation not available
   
 0.917
LOC114658153
POU domain, class 5, transcription factor 1-like.
   
 0.917
rbbp4
RB binding protein 4, chromatin remodeling factor.
   
  0.899
LOC114641485
Histone-binding protein RBBP7.
   
  0.899
crbn
Cereblon.
    
 
 0.796
wdr73
WD repeat domain 73.
    
 0.741
gatad2b
GATA zinc finger domain containing 2B.
    
 0.731
gatad2a
GATA zinc finger domain containing 2A.
    
 0.731
LOC114652263
methyl-CpG-binding domain protein 2-like.
   
  0.713
mbd3
methyl-CpG binding domain protein 3.
   
  0.713
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.