STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
msl3MSL complex subunit 3. (492 aa)    
Predicted Functional Partners:
msl2
MSL complex subunit 2.
    
 0.998
msl1
MSL complex subunit 1.
    
 0.998
dmap1
DNA methyltransferase 1 associated protein 1.
    
 0.988
meaf6
MYST/Esa1 associated factor 6.
   
 0.987
mrgbp
MRG domain binding protein.
   
 0.985
kat5
Lysine acetyltransferase 5.
    
 0.983
vps72
Vacuolar protein sorting 72 homolog.
    
 0.982
kat8
Lysine acetyltransferase 8.
    
 0.982
trrap
Transformation/transcription domain associated protein.
   
 0.981
ruvbl2
RuvB like AAA ATPase 2.
   
 0.980
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.