STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chst14Carbohydrate sulfotransferase 14. (338 aa)    
Predicted Functional Partners:
csgalnact2
Chondroitin sulfate N-acetylgalactosaminyltransferase 2.
     
 0.683
dcn
Decorin.
     
 0.668
csgalnact1
Chondroitin sulfate N-acetylgalactosaminyltransferase 1.
     
 0.662
chsy1
Chondroitin sulfate synthase 1.
     
 0.566
chst15
Carbohydrate sulfotransferase 15.
      
 0.557
b3gat3
Beta-1,3-glucuronyltransferase 3.
     
 0.554
b3gat2
Beta-1,3-glucuronyltransferase 2.
     
 0.554
b3gat1
Beta-1,3-glucuronyltransferase 1.
     
 0.545
chst7
Carbohydrate sulfotransferase 7.
      
 0.526
ENSECRP00000022740
annotation not available
     
 0.526
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.