STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
srcapSnf2 related CREBBP activator protein. (3603 aa)    
Predicted Functional Partners:
ENSECRP00000014480
annotation not available
    
 0.987
ruvbl2
RuvB like AAA ATPase 2.
   
 0.987
ruvbl1
RuvB like AAA ATPase 1.
    
 0.987
dmap1
DNA methyltransferase 1 associated protein 1.
   
 0.986
vps72
Vacuolar protein sorting 72 homolog.
    
 0.985
yeats4
YEATS domain containing 4.
    
 0.983
actr6
Actin related protein 6.
    
 0.981
cfdp1
Craniofacial development protein 1.
    
 0.968
LOC114648650
Histone H2A.V.
    
 0.963
LOC114654554
Histone H2A.Z.
    
 0.963
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.