STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prps2Phosphoribosyl pyrophosphate synthetase 2. (320 aa)    
Predicted Functional Partners:
h6pd
Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.
  
 0.938
bckdhb
Branched chain keto acid dehydrogenase E1 subunit beta.
  
 0.887
pdhb
Pyruvate dehydrogenase E1 beta subunit.
  
 0.887
ENSECRP00000011043
annotation not available
     
 0.847
LOC114655300
Transient receptor potential cation channel subfamily M member 2-like.
     
 0.847
prpsap1
Phosphoribosyl pyrophosphate synthetase associated protein 1.
  
 
0.833
prpsap2
Phosphoribosyl pyrophosphate synthetase associated protein 2.
  
 
0.832
ENSECRP00000013991
annotation not available
   
 
0.825
dlat
Dihydrolipoamide S-acetyltransferase.
  
 0.825
dlst
Dihydrolipoamide S-succinyltransferase.
  
 0.825
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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