STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000017468annotation not available (618 aa)    
Predicted Functional Partners:
ENSECRP00000033362
annotation not available
   
 0.844
arid4a
AT-rich interaction domain 4A.
    
  0.825
arid4b
AT-rich interaction domain 4B.
    
  0.825
whrn
Whirlin.
    
 0.804
ush1c
USH1 protein network component harmonin.
   
 0.788
ENSECRP00000006410
annotation not available
 
  
 0.780
LOC114648833
Myosin light polypeptide 6-like.
    
 0.737
mylpf
Myosin light chain, phosphorylatable, fast skeletal muscle.
    
  0.723
LOC114653424
Myosin regulatory light chain 2, smooth muscle minor isoform.
    
 0.701
LOC114659546
Myosin regulatory light polypeptide 9.
    
 0.701
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.