STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ipo4Importin 4. (1064 aa)    
Predicted Functional Partners:
polr1a
RNA polymerase I subunit A.
   
    0.919
gmps
Guanine monophosphate synthase.
   
    0.909
ipo5
Importin 5.
   
 
0.901
rrp12
Ribosomal RNA processing 12 homolog.
   
 
 0.886
nat10
N-acetyltransferase 10.
   
  
 0.879
fbl
Fibrillarin.
   
 
 0.879
kpnb1
Karyopherin subunit beta 1.
   
 
 0.876
polr1b
RNA polymerase I subunit B.
   
  
 0.866
LOC114659684
GTP-binding nuclear protein Ran.
   
 
 0.858
ran
RAN, member RAS oncogene family.
   
 
 0.858
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.