STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
llgl1LLGL scribble cell polarity complex component 1. (1050 aa)    
Predicted Functional Partners:
prkci
Protein kinase C iota.
    
 0.975
prkcz
Protein kinase C zeta.
    
 0.951
dlg5
Discs large MAGUK scaffold protein 5.
    
 0.869
exoc4
Exocyst complex component 4.
    
 0.848
llgl2
LLGL scribble cell polarity complex component 2.
  
  
 
0.845
scrib
Scribble planar cell polarity protein.
    
 0.842
lrrc1
Leucine rich repeat containing 1.
    
 0.842
ENSECRP00000012066
annotation not available
    
 0.829
ENSECRP00000012442
annotation not available
    
 0.829
ENSECRP00000012504
annotation not available
    
 0.829
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.