STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc35e1Solute carrier family 35 member E1. (377 aa)    
Predicted Functional Partners:
slc35g1
Solute carrier family 35 member G1.
      
 0.559
slc35c2
Solute carrier family 35 member C2.
      
 0.558
slc35c1
Solute carrier family 35 member C1.
      
 0.555
btrc
Beta-transducin repeat containing E3 ubiquitin protein ligase.
   
 
  0.525
fbxw11
F-box and WD repeat domain containing 11.
   
 
  0.525
nr2c2ap
Nuclear receptor 2C2 associated protein.
      
 0.506
slc25a42
Solute carrier family 25 member 42.
      
 0.493
cherp
Calcium homeostasis endoplasmic reticulum protein.
      
 0.491
tgds
TDP-glucose 4,6-dehydratase.
   
 
 0.481
sugp1
SURP and G-patch domain containing 1.
      
 0.473
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.