STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114665376Importin subunit alpha-7. (485 aa)    
Predicted Functional Partners:
kpnb1
Karyopherin subunit beta 1.
   
 0.942
cse1l
Chromosome segregation 1 like.
   
 0.932
xpo5
Exportin 5.
   
 0.834
LOC114650950
E3 SUMO-protein ligase RanBP2-like.
   
 0.826
LOC114659684
GTP-binding nuclear protein Ran.
   
 0.765
ran
RAN, member RAS oncogene family.
   
 0.765
ENSECRP00000029575
annotation not available
   
 0.765
ncbp1
Nuclear cap binding protein subunit 1.
   
 
 0.750
ncbp2
Nuclear cap binding protein subunit 2.
   
 
 0.749
snupn
Snurportin 1.
     
 0.748
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.