STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbm24RNA binding motif protein 24. (231 aa)    
Predicted Functional Partners:
rbfox1
RNA binding fox-1 homolog 1.
  
 
 0.828
rbfox2
RNA binding fox-1 homolog 2.
  
 
0.732
ENSECRP00000033665
annotation not available
   
 
 0.706
sf3b5
Splicing factor 3b subunit 5.
     
 0.682
sf3b1
Splicing factor 3b subunit 1.
     
 0.675
sf3b3
Splicing factor 3b subunit 3.
     
 0.666
sf3b4
Splicing factor 3b subunit 4.
     
 0.653
ENSECRP00000032736
annotation not available
  
   
 0.610
ENSECRP00000016947
annotation not available
  
 
 
 0.578
elavl3
ELAV like RNA binding protein 3.
  
 
 
 0.564
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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