STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arap3ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3. (1608 aa)    
Predicted Functional Partners:
LOC114664303
arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1-like.
   
0.707
rap1b
RAP1B, member of RAS oncogene family.
    
 0.663
LOC114647779
Ras-related protein Rap-1A.
    
 0.663
rhob
Ras homolog family member B.
    
  0.650
ENSECRP00000002180
annotation not available
    
  0.650
LOC114648818
Rho-related GTP-binding protein RhoA-D.
    
  0.650
LOC114660750
Rho-related GTP-binding protein RhoA-A.
    
  0.650
rhoa
Ras homolog family member A.
    
  0.650
smap2
Small ArfGAP2.
     
0.633
smap1
Small ArfGAP 1.
     
0.633
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.