STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
drg2Developmentally regulated GTP binding protein 2. (364 aa)    
Predicted Functional Partners:
rwdd1
RWD domain containing 1.
   
 
 0.995
gcn1
GCN1 activator of EIF2AK4.
   
 
 0.972
zc3h15
Zinc finger CCCH-type containing 15.
   
 
 0.967
rwdd4
RWD domain containing 4.
   
 
 0.898
rell1
RELT like 1.
   
 
 0.898
rpl27a
Ribosomal protein L27a.
   
 
 0.876
rps3
Ribosomal protein S3.
   
   0.875
ddx56
DEAD-box helicase 56.
   
   0.870
rps15
Ribosomal protein S15.
   
   0.833
rps20
Ribosomal protein S20.
   
   0.831
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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