STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gferGrowth factor, augmenter of liver regeneration. (185 aa)    
Predicted Functional Partners:
ENSECRP00000032807
annotation not available
    
 0.990
LOC114650864
Cytochrome c oxidase copper chaperone.
   
 0.801
timm10
Translocase of inner mitochondrial membrane 10.
   
 0.780
timm13
Translocase of inner mitochondrial membrane 13.
   
 
 0.755
timm9
Translocase of inner mitochondrial membrane 9.
   
 0.676
LOC114650788
Cytochrome c oxidase assembly factor 5.
   
  
 0.658
timm50
Translocase of inner mitochondrial membrane 50.
   
  
 0.653
ENSECRP00000028322
annotation not available
   
 0.635
timm8a
Translocase of inner mitochondrial membrane 8A.
   
 0.628
LOC114655328
Cytochrome c.
    
 
 0.581
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.