STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tbckTBC1 domain containing kinase. (731 aa)    
Predicted Functional Partners:
c1h12orf4
Chromosome 1 C12orf4 homolog.
    
 
 0.742
ppp1r21
Protein phosphatase 1 regulatory subunit 21.
    
 
 0.596
LOC114649212
MOB kinase activator 1A.
      
 0.554
il6r
Interleukin 6 receptor.
    
   0.552
nme6
NME/NM23 nucleoside diphosphate kinase 6.
   
  
 0.539
nol10
Nucleolar protein 10.
     
 0.534
sh3bgrl3
SH3 domain binding glutamate rich protein like 3.
      
 0.495
cnpy2
Canopy FGF signaling regulator 2.
      
 0.471
ENSECRP00000007801
annotation not available
      
 0.400
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.