STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
adap1ArfGAP with dual PH domains 1. (377 aa)    
Predicted Functional Partners:
arfgap1
ADP ribosylation factor GTPase activating protein 1.
    
0.823
LOC114649345
Kinesin-like protein KIF13B.
    
 
 0.699
kif13a
Kinesin family member 13A.
    
 
 0.699
appl2
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2.
    
 0.661
appl1
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.
    
 0.661
arfgap2
ADP ribosylation factor GTPase activating protein 2.
    
0.637
arfgap3
ADP ribosylation factor GTPase activating protein 3.
    
0.637
LOC114664303
arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1-like.
    
0.603
git1
GIT ArfGAP 1.
     
0.581
git2
GIT ArfGAP 2.
     
0.581
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.