STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
grsf1G-rich RNA sequence binding factor 1. (402 aa)    
Predicted Functional Partners:
hnrnpk
Heterogeneous nuclear ribonucleoprotein K.
   
 0.787
srsf1
Serine and arginine rich splicing factor 1.
   
 0.774
ncbp2
Nuclear cap binding protein subunit 2.
   
 0.770
hnrnpa3
Heterogeneous nuclear ribonucleoprotein A3.
   
 0.762
hnrnpa1
Heterogeneous nuclear ribonucleoprotein A1.
   
 0.762
LOC114660329
Heterogeneous nuclear ribonucleoprotein A0-like.
   
 0.762
LOC114660330
Heterogeneous nuclear ribonucleoprotein A0-like.
   
 0.762
hnrnpm
Heterogeneous nuclear ribonucleoprotein M.
   
 0.758
ncbp1
Nuclear cap binding protein subunit 1.
   
 0.746
srsf2
Serine and arginine rich splicing factor 2.
   
 0.740
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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