STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tbc1d9bTBC1 domain family member 9B. (1217 aa)    
Predicted Functional Partners:
ENSECRP00000001571
annotation not available
   
 
  0.979
gak
Cyclin G associated kinase.
   
 
  0.979
dnajc6
DnaJ heat shock protein family (Hsp40) member C6.
   
 
  0.654
igf2r
Insulin like growth factor 2 receptor.
   
 
  0.619
pik3c2a
Phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha.
     
 0.587
pik3c2b
Phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta.
     
 0.587
yipf6
Yip1 domain family member 6.
   
 
  0.574
hip1
Huntingtin interacting protein 1.
   
 
  0.574
hip1r
Huntingtin interacting protein 1 related.
   
 
  0.574
LOC114656807
AP-1 complex subunit beta-1.
   
 
  0.547
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.