STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hyou1Hypoxia up-regulated 1. (997 aa)    
Predicted Functional Partners:
hspa5
Heat shock protein family A (Hsp70) member 5.
  
0.999
ankrd45
Ankyrin repeat domain 45.
   
 0.995
hsp90b1
Heat shock protein 90 beta family member 1.
  
 0.991
dnajc10
DnaJ heat shock protein family (Hsp40) member C10.
  
 0.990
ppib
Peptidylprolyl isomerase B.
  
 0.970
sil1
SIL1 nucleotide exchange factor.
  
 0.965
hspbp1
HSPA (Hsp70) binding protein 1.
  
 0.940
mzb1
Marginal zone B and B1 cell specific protein.
    
  0.937
pdia6
Protein disulfide isomerase family A member 6.
  
 0.925
dnajb11
DnaJ heat shock protein family (Hsp40) member B11.
  
 0.922
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.