STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114662357Glypican-4-like. (554 aa)    
Predicted Functional Partners:
fzd2
Frizzled class receptor 2.
    
 0.868
fzd7
Frizzled class receptor 7.
    
 0.858
fzd3
Frizzled class receptor 3.
    
 0.849
fzd4
Frizzled class receptor 4.
    
 0.845
fzd8
Frizzled class receptor 8.
    
 0.845
ENSECRP00000019694
annotation not available
    
 0.845
ENSECRP00000021959
annotation not available
    
 0.845
fzd5
Frizzled class receptor 5.
    
 0.845
fzd6
Frizzled class receptor 6.
    
 0.845
fzd10
Frizzled class receptor 10.
    
 0.845
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.