STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114657245C-C motif chemokine 5-like. (100 aa)    
Predicted Functional Partners:
LOC114643273
C-C chemokine receptor type 7-like.
    
 0.880
ENSECRP00000018988
annotation not available
    
 0.861
ccr7
C-C motif chemokine receptor 7.
    
 0.856
ccr9
C-C motif chemokine receptor 9.
    
  0.854
cxcr4
C-X-C motif chemokine receptor 4.
    
 0.853
LOC114657243
C-C motif chemokine 3-like.
  
  
 
0.852
irf6
Interferon regulatory factor 6.
   
 
  0.830
irf5
Interferon regulatory factor 5.
   
 
  0.830
LOC114656148
C-X-C chemokine receptor type 1-like.
    
  0.779
LOC114656149
C-X-C chemokine receptor type 1-like.
    
  0.779
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.