STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nt5c1a5'-nucleotidase, cytosolic IA. (368 aa)    
Predicted Functional Partners:
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.963
LOC114657866
Hypoxanthine-guanine phosphoribosyltransferase-like.
  
  0.893
ampd1
Adenosine monophosphate deaminase 1.
  
 
 0.892
hprt1
Hypoxanthine phosphoribosyltransferase 1.
   
  0.892
entpd5
Ectonucleoside triphosphate diphosphohydrolase 5 (inactive).
    
 0.887
ENSECRP00000016581
annotation not available
    
  0.883
nampt
Nicotinamide phosphoribosyltransferase.
   
  0.881
LOC114668379
Nicotinamide phosphoribosyltransferase-like.
   
  0.881
guk1
Guanylate kinase 1.
   
 0.877
nudt12
Nudix hydrolase 12.
   
  0.876
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.