STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aplp2Amyloid beta precursor like protein 2. (780 aa)    
Predicted Functional Partners:
nae1
NEDD8 activating enzyme E1 subunit 1.
    
 0.909
sorl1
Sortilin related receptor 1.
    
 0.900
apbb2
Amyloid beta precursor protein binding family B member 2.
    
 0.885
apbb3
Amyloid beta precursor protein binding family B member 3.
    
 0.885
hmmr
Hyaluronan mediated motility receptor.
    
 0.885
ncstn
Nicastrin.
    
 0.864
pitrm1
Pitrilysin metallopeptidase 1.
    
 
 0.804
apoe
Apolipoprotein E.
    
 0.772
bace2
Beta-secretase 2.
    
 0.760
bace1
Beta-secretase 1.
    
 0.760
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.