STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnajc19DnaJ heat shock protein family (Hsp40) member C19. (138 aa)    
Predicted Functional Partners:
timm23
Translocase of inner mitochondrial membrane 23.
   
 0.988
LOC114661138-2
Mitochondrial import inner membrane translocase subunit TIM16-like.
   
 0.987
timm21
Translocase of inner mitochondrial membrane 21.
   
 0.975
timm50
Translocase of inner mitochondrial membrane 50.
   
 0.973
grpel1
GrpE like 1, mitochondrial.
   
 0.962
timm44
Translocase of inner mitochondrial membrane 44.
    
 0.952
romo1
Reactive oxygen species modulator 1.
   
 0.948
grpel2
GrpE like 2, mitochondrial.
   
 0.942
timm17a
Translocase of inner mitochondrial membrane 17A.
   
 0.935
timm17b
Translocase of inner mitochondrial membrane 17B.
   
 0.935
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.