STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mfsd2aMajor facilitator superfamily domain containing 2A. (525 aa)    
Predicted Functional Partners:
tyms
Thymidylate synthetase.
    
  0.720
rrm1
Ribonucleotide reductase catalytic subunit M1.
    
  0.709
tk1
Thymidine kinase 1.
    
  0.705
cstf3
Cleavage stimulation factor subunit 3.
    
  0.697
nt5e
5'-nucleotidase ecto.
    
 0.685
gapdh
Glyceraldehyde-3-phosphate dehydrogenase.
    
 0.663
ENSECRP00000014714
annotation not available
    
 0.663
LOC114667591
Glyceraldehyde-3-phosphate dehydrogenase 2.
    
 0.663
LOC114656119
Thioredoxin domain-containing protein 3 homolog.
    
  0.580
dtymk
Deoxythymidylate kinase.
    
 0.580
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.