STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114657211Potassium channel subfamily T member 1-like. (1146 aa)    
Predicted Functional Partners:
kcnmb4
Potassium calcium-activated channel subfamily M regulatory beta subunit 4.
    
 0.972
ENSECRP00000017276
annotation not available
     
 0.859
kcnn4
Potassium calcium-activated channel subfamily N member 4.
     
 0.704
thap1
THAP domain containing 1.
    
 0.694
thap7
THAP domain containing 7.
    
 0.694
prkacb
Protein kinase cAMP-activated catalytic subunit beta.
    
 0.694
prkx
Protein kinase X-linked.
    
 0.694
prkaca
Protein kinase cAMP-activated catalytic subunit alpha.
    
 0.694
LOC114662875
Small conductance calcium-activated potassium channel protein 2-like.
     
 0.670
kcnn2
Potassium calcium-activated channel subfamily N member 2.
     
 0.667
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.