STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tac1Tachykinin precursor 1. (113 aa)    
Predicted Functional Partners:
LOC114649191
substance-P receptor-like.
    
 0.958
tacr2
Tachykinin receptor 2.
    
 0.958
vip
Vasoactive intestinal peptide.
   
  
 0.928
ENSECRP00000006560
annotation not available
    
 0.915
LOC114642194
neuromedin-K receptor-like.
    
 0.915
nts
Neurotensin.
   
 
 0.824
ENSECRP00000024445
annotation not available
    
 0.822
agt
Angiotensinogen.
     
 0.814
LOC114648944
Cysteinyl leukotriene receptor 1-like.
    
 0.808
sdhb
Succinate dehydrogenase complex iron sulfur subunit B.
    
 
 0.803
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.