STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114665209Orexin receptor type 1-like. (439 aa)    
Predicted Functional Partners:
LOC114642333
Inactive phospholipase C-like protein 2.
    
 0.776
hcrt
Hypocretin neuropeptide precursor.
    
 0.776
gngt1
G protein subunit gamma transducin 1.
   
 0.762
LOC114656079
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1-like.
    
 0.683
gnb2
G protein subunit beta 2.
    
 0.683
LOC114646404
Guanine nucleotide-binding protein subunit beta-4.
    
 0.683
gnb5
G protein subunit beta 5.
    
 0.683
gnb3
G protein subunit beta 3.
    
 0.683
grk7
G protein-coupled receptor kinase 7.
   
 0.673
LOC114652196
Guanine nucleotide-binding protein G(q) subunit alpha.
    
 0.646
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.