STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aars1alanyl-tRNA synthetase 1. (968 aa)    
Predicted Functional Partners:
cdc16
Cell division cycle 16.
   
 0.960
anapc4
Anaphase promoting complex subunit 4.
   
 0.958
anapc5
Anaphase promoting complex subunit 5.
   
 0.957
anapc2
Anaphase promoting complex subunit 2.
    
 0.954
mysm1
Myb like, SWIRM and MPN domains 1.
   
 0.951
anapc7
Anaphase promoting complex subunit 7.
   
 0.944
eprs1
glutamyl-prolyl-tRNA synthetase 1.
  
 
 0.934
anapc13
Anaphase promoting complex subunit 13.
    
 0.933
ptges3l
Prostaglandin E synthase 3 like.
   
 
 0.929
cdc26
Cell division cycle 26.
    
 0.920
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.