STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fermt2Fermitin family member 2. (685 aa)    
Predicted Functional Partners:
ilk
Integrin linked kinase.
   
 
 0.889
fblim1
Filamin binding LIM protein 1.
    
 0.800
itgb6
Integrin subunit beta 6.
   
 0.749
itgb7
Integrin subunit beta 7.
   
 0.747
itgb4
Integrin subunit beta 4.
   
 0.744
itgb5
Integrin subunit beta 5.
   
 0.737
itgb2
Integrin subunit beta 2.
   
 0.737
itgb8
Integrin subunit beta 8.
   
 0.732
ENSECRP00000008987
annotation not available
    
 0.727
LOC114649011
Thyroid receptor-interacting protein 6-like.
    
 0.727
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.