STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnaaf5Dynein axonemal assembly factor 5. (861 aa)    
Predicted Functional Partners:
xpo6
Exportin 6.
    
 
 0.634
cfap300
Cilia and flagella associated protein 300.
    
 
 0.586
spag1
Sperm associated antigen 1.
      
 0.573
zmynd10
Zinc finger MYND-type containing 10.
      
 0.568
dnaaf3
Dynein axonemal assembly factor 3.
      
 0.561
lrrc6
Leucine rich repeat containing 6.
      
 0.558
ccdc103
Coiled-coil domain containing 103.
      
 0.554
ENSECRP00000017349
annotation not available
      
 0.551
armc4
Armadillo repeat containing 4.
      
 0.550
LOC114647208
Radial spoke head protein 4 homolog A-like.
    
 
 0.529
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.