STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
map7d3MAP7 domain containing 3. (845 aa)    
Predicted Functional Partners:
ENSECRP00000011256
annotation not available
    
 0.779
suv39h1
Suppressor of variegation 3-9 homolog 1.
    
 0.746
pnn
Pinin, desmosome associated protein.
   
 0.708
LOC114660801
Non-structural maintenance of chromosomes element 3 homolog.
    
 0.697
eif4a3
Eukaryotic translation initiation factor 4A3.
   
  0.692
med1
Mediator complex subunit 1.
   
  0.683
magoh
Mago homolog, exon junction complex subunit.
    
  0.677
ganc
Glucosidase alpha, neutral C.
    
 0.667
gusb
Glucuronidase beta.
     
 0.648
ENSECRP00000017650
annotation not available
    
  0.643
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.