STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000019212annotation not available (119 aa)    
Predicted Functional Partners:
taf1d
TATA-box binding protein associated factor, RNA polymerase I subunit D.
    
 0.883
gcna
Germ cell nuclear acidic peptidase.
    
 0.795
tbp
TATA-box binding protein.
   
 0.743
LOC114666721
TATA-box-binding protein-like.
   
 0.743
ENSECRP00000019819
annotation not available
  
  0.705
taf1b
TATA-box binding protein associated factor, RNA polymerase I subunit B.
   
 
  0.703
tbpl1
TATA-box binding protein like 1.
   
 0.677
rrn3
RRN3 homolog, RNA polymerase I transcription factor.
    
 0.665
mnat1
MNAT1 component of CDK activating kinase.
    
 0.658
acp1
Acid phosphatase 1.
  
 
  0.643
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.