STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
stk3Serine/threonine kinase 3. (505 aa)    
Predicted Functional Partners:
sav1
Salvador family WW domain containing protein 1.
    
 0.990
LOC114649212
MOB kinase activator 1A.
   
 0.981
LOC114654926
Cysteine-rich protein 1-like.
    
 0.973
rassf5
Ras association domain family member 5.
    
 0.968
rassf1
Ras association domain family member 1.
    
 0.959
ENSECRP00000007801
annotation not available
   
 0.948
lats2
Large tumor suppressor kinase 2.
    
0.934
lats1
Large tumor suppressor kinase 1.
    
0.934
rassf6
Ras association domain family member 6.
    
 0.923
mob1b
MOB kinase activator 1B.
    
 0.902
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.