STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114662539NTF2-related export protein 2-like. (144 aa)    
Predicted Functional Partners:
nxf1
Nuclear RNA export factor 1.
    
 0.999
LOC114650950
E3 SUMO-protein ligase RanBP2-like.
   
 0.989
LOC114662491
Nuclear pore glycoprotein p62-like.
    
 0.956
nup35
Nucleoporin 35.
   
 
 0.940
nup54
Nucleoporin 54.
   
 
 0.939
nup214
Nucleoporin 214.
    
 0.868
nup153
Nucleoporin 153.
     
 0.863
rae1
Ribonucleic acid export 1.
   
 
 0.851
nutf2
Nuclear transport factor 2.
   
 
 0.844
LOC114663448
Nuclear transport factor 2-like.
   
 
 0.844
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.