STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tsc2TSC complex subunit 2. (1807 aa)    
Predicted Functional Partners:
tsc1
TSC complex subunit 1.
   
 0.999
LOC114641814
TBC1 domain family member 7-like.
    
 0.999
rhebl1
RHEB like 1.
    
 0.986
rheb
Ras homolog, mTORC1 binding.
    
 0.981
crygn
Crystallin gamma N.
    
 0.965
trap1
TNF receptor associated protein 1.
   
 0.963
LOC114666696
Heat shock protein HSP 90-alpha.
   
 0.963
LOC114666697
Heat shock protein HSP 90-alpha 1.
   
 0.963
hsp90b1
Heat shock protein 90 beta family member 1.
    
 0.954
mtor
Mechanistic target of rapamycin kinase.
    
 0.943
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.