STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tctn3Tectonic family member 3. (354 aa)    
Predicted Functional Partners:
b9d2
B9 domain containing 2.
    
 0.939
b9d1
B9 domain containing 1.
    
 0.922
tmem231
Transmembrane protein 231.
   
 0.911
mks1
MKS transition zone complex subunit 1.
    
 0.893
LOC114652769
Coiled-coil and C2 domain-containing protein 2A-like.
    
 0.877
cc2d2a
Coiled-coil and C2 domain containing 2A.
    
 0.877
tmem67
Transmembrane protein 67.
   
 
 0.873
tmem216
Transmembrane protein 216.
     
 0.869
ahi1
Abelson helper integration site 1.
    
 0.859
tmem107
Transmembrane protein 107.
     
 0.825
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.